Cell Atlas
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Pristina leidyi
Aedes aegypti
Drosophila melanogaster (Fly Cell Atlas)
Paraspadella gotoi (adult)
Ciona intestinalis (larva)
Mus musculus (Tabula muris)
Acropora millepora (adult)
Aurelia coerulea
Clytia hemisphaerica (medusa)
Clytia hemisphaerica (larva)
Hydra vulgaris (polyp)
Hydractinia symbiolongicarpus
Nematostella vectensis (adult)
Oculina arbuscula (adult)
Oculina patagonica (adult)
Stylophora pistillata (adult 2)
Stylophora pistillata (adult)
Stylophora pistillata (larva)
Stylophora pistillata (polyp)
Turritopsis rubra
Xenia sp.
Mnemiopsis leidyi
Magallana gigas (larva)
Caenorhabditis elegans (adult)
Caenorhabditis elegans (L2 larva)
Cladtertia collaboinventa (H23 strain)
Hoilungia hongkongensis (H13 strain)
Trichoplax adhaerens (H1 strain)
Trichoplax sp. (H2 strain)
Prostheceraeus crozeri (larva)
Schistosoma mansoni (adult)
Schmidtea mediterranea (adult)
Amphimedon queenslandica (larva)
Amphimedon queenslandica (adult)
Halisarca dujardinii (adult)
Spongilla lacustris (adult)
Arabidopsis thaliana (only adult tissues)
Glycine max (whole plant)
Xenoturbella bocki
Information
Atlas overview
Gene lists
Gene modules
Cell type markers
Gene view
Gene ontology
Cross-species
Show all
Cell Atlas
Information
Atlas overview
Gene lists
Gene modules
Cell type markers
Gene view
Gene ontology
Cross-species
Metacell projection
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Export data
Format
CSV
TSV
JSON
Label
View
Download
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API
link
See also
Downloads
REST API
View options
Cells
Metacells
Labels
Links
Color by
Cell type
CytoTRACE
Median UMIs
Gene expression
Metacell selection
List markers
Filter heatmap
Gene expression heatmap
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Export data
Format
CSV
TSV
JSON
Label
View
Download
Copy
API
link
See also
Downloads
REST API
Genes
5 markers per cluster
Number of markers per cluster
Metacells
All metacells
Filter metacells
Select all metacells
digestive_filaments
epidermis
gastrodermis_1
gastrodermis_2
gland_1
gland_2
gland_3
neuron_1
neuron_2
precursors
unknown_1
unknown_3
unknown_4
unknown_5
unknown_6
stypis01_MC_00012
stypis01_MC_00013
stypis01_MC_00014
stypis01_MC_00015
stypis01_MC_00016
stypis01_MC_00017
stypis01_MC_00018
stypis01_MC_00019
stypis01_MC_00020
stypis01_MC_00021
stypis01_MC_00022
stypis01_MC_00023
stypis01_MC_00024
stypis01_MC_00025
stypis01_MC_00026
stypis01_MC_00076
stypis01_MC_00077
stypis01_MC_00078
stypis01_MC_00079
stypis01_MC_00080
stypis01_MC_00081
stypis01_MC_00082
stypis01_MC_00083
stypis01_MC_00027
stypis01_MC_00028
stypis01_MC_00029
stypis01_MC_00036
stypis01_MC_00037
stypis01_MC_00038
stypis01_MC_00039
stypis01_MC_00040
stypis01_MC_00041
stypis01_MC_00042
stypis01_MC_00043
stypis01_MC_00044
stypis01_MC_00045
stypis01_MC_00046
stypis01_MC_00047
stypis01_MC_00048
stypis01_MC_00049
stypis01_MC_00050
stypis01_MC_00051
stypis01_MC_00052
stypis01_MC_00053
stypis01_MC_00054
stypis01_MC_00055
stypis01_MC_00056
stypis01_MC_00057
stypis01_MC_00058
stypis01_MC_00059
stypis01_MC_00060
stypis01_MC_00061
stypis01_MC_00062
stypis01_MC_00063
stypis01_MC_00064
stypis01_MC_00065
stypis01_MC_00066
stypis01_MC_00067
stypis01_MC_00068
stypis01_MC_00069
stypis01_MC_00070
stypis01_MC_00071
stypis01_MC_00072
stypis01_MC_00073
stypis01_MC_00074
stypis01_MC_00075
stypis01_MC_00084
stypis01_MC_00085
stypis01_MC_00086
stypis01_MC_00087
stypis01_MC_00088
stypis01_MC_00089
stypis01_MC_00090
stypis01_MC_00091
stypis01_MC_00092
stypis01_MC_00093
stypis01_MC_00094
stypis01_MC_00095
stypis01_MC_00096
stypis01_MC_00097
stypis01_MC_00098
stypis01_MC_00099
stypis01_MC_00100
stypis01_MC_00101
stypis01_MC_00102
stypis01_MC_00103
stypis01_MC_00104
stypis01_MC_00105
stypis01_MC_00106
stypis01_MC_00107
stypis01_MC_00108
stypis01_MC_00109
stypis01_MC_00110
stypis01_MC_00111
stypis01_MC_00112
stypis01_MC_00113
stypis01_MC_00114
stypis01_MC_00115
stypis01_MC_00116
stypis01_MC_00117
stypis01_MC_00118
stypis01_MC_00119
stypis01_MC_00120
stypis01_MC_00121
stypis01_MC_00122
stypis01_MC_00123
stypis01_MC_00124
stypis01_MC_00125
stypis01_MC_00126
stypis01_MC_00127
stypis01_MC_00128
stypis01_MC_00129
stypis01_MC_00130
stypis01_MC_00131
stypis01_MC_00132
stypis01_MC_00133
stypis01_MC_00134
stypis01_MC_00135
stypis01_MC_00136
stypis01_MC_00137
stypis01_MC_00138
stypis01_MC_00139
stypis01_MC_00140
stypis01_MC_00141
stypis01_MC_00142
stypis01_MC_00143
stypis01_MC_00144
stypis01_MC_00145
stypis01_MC_00146
stypis01_MC_00147
stypis01_MC_00148
stypis01_MC_00149
stypis01_MC_00150
stypis01_MC_00151
stypis01_MC_00152
stypis01_MC_00153
stypis01_MC_00154
stypis01_MC_00155
stypis01_MC_00156
stypis01_MC_00157
stypis01_MC_00158
stypis01_MC_00159
stypis01_MC_00160
stypis01_MC_00000
stypis01_MC_00001
stypis01_MC_00002
stypis01_MC_00003
stypis01_MC_00004
stypis01_MC_00005
stypis01_MC_00006
stypis01_MC_00007
stypis01_MC_00008
stypis01_MC_00009
stypis01_MC_00010
stypis01_MC_00011
stypis01_MC_00030
stypis01_MC_00031
stypis01_MC_00032
stypis01_MC_00033
stypis01_MC_00034
stypis01_MC_00035
Fold-change thresholds
FC ≥
2
Minimum fold-change
Clip FC ≤
0
Scale maximum fold-change
Lower limit of selection depends on minimum fold-change.
Apply