Cell Atlas
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Pristina leidyi
Aedes aegypti
Drosophila melanogaster (Fly Cell Atlas)
Paraspadella gotoi (adult)
Ciona intestinalis (larva)
Mus musculus (Tabula muris)
Acropora millepora (adult)
Aurelia coerulea
Clytia hemisphaerica (medusa)
Clytia hemisphaerica (larva)
Hydra vulgaris (polyp)
Hydractinia symbiolongicarpus
Nematostella vectensis (adult)
Oculina arbuscula (adult)
Oculina patagonica (adult)
Stylophora pistillata (adult 2)
Stylophora pistillata (adult)
Stylophora pistillata (larva)
Stylophora pistillata (polyp)
Turritopsis rubra
Xenia sp.
Mnemiopsis leidyi
Magallana gigas (larva)
Caenorhabditis elegans (adult)
Caenorhabditis elegans (L2 larva)
Cladtertia collaboinventa (H23 strain)
Hoilungia hongkongensis (H13 strain)
Trichoplax adhaerens (H1 strain)
Trichoplax sp. (H2 strain)
Prostheceraeus crozeri (larva)
Schistosoma mansoni (adult)
Schmidtea mediterranea (adult)
Amphimedon queenslandica (larva)
Amphimedon queenslandica (adult)
Halisarca dujardinii (adult)
Spongilla lacustris (adult)
Arabidopsis thaliana (only adult tissues)
Glycine max (whole plant)
Xenoturbella bocki
Information
Atlas overview
Gene lists
Gene modules
Cell type markers
Gene view
Gene ontology
Cross-species
Show all
Cell Atlas
Information
Atlas overview
Gene lists
Gene modules
Cell type markers
Gene view
Gene ontology
Cross-species
Metacell projection
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Export data
Format
CSV
TSV
JSON
Label
View
Download
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API
link
See also
Downloads
REST API
View options
Cells
Metacells
Labels
Links
Color by
Cell type
CytoTRACE
Median UMIs
Gene expression
Metacell selection
List markers
Filter heatmap
Gene expression heatmap
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Export data
Format
CSV
TSV
JSON
Label
View
Download
Copy
API
link
See also
Downloads
REST API
Genes
5 markers per cluster
Number of markers per cluster
Metacells
All metacells
Filter metacells
Select all metacells
calicoblast
cnidocyte
epidermis_1
gastrodermis
gland_1
gland_2
neuron_1
neuron_2
precursors
unknown_1
unknown_2
unknown_3
stypis02_MC_00045
stypis02_MC_00046
stypis02_MC_00047
stypis02_MC_00048
stypis02_MC_00049
stypis02_MC_00050
stypis02_MC_00051
stypis02_MC_00052
stypis02_MC_00053
stypis02_MC_00054
stypis02_MC_00055
stypis02_MC_00056
stypis02_MC_00057
stypis02_MC_00058
stypis02_MC_00059
stypis02_MC_00060
stypis02_MC_00061
stypis02_MC_00033
stypis02_MC_00034
stypis02_MC_00035
stypis02_MC_00036
stypis02_MC_00037
stypis02_MC_00038
stypis02_MC_00039
stypis02_MC_00040
stypis02_MC_00062
stypis02_MC_00063
stypis02_MC_00064
stypis02_MC_00065
stypis02_MC_00066
stypis02_MC_00067
stypis02_MC_00068
stypis02_MC_00069
stypis02_MC_00070
stypis02_MC_00071
stypis02_MC_00072
stypis02_MC_00073
stypis02_MC_00074
stypis02_MC_00075
stypis02_MC_00076
stypis02_MC_00077
stypis02_MC_00078
stypis02_MC_00079
stypis02_MC_00012
stypis02_MC_00013
stypis02_MC_00014
stypis02_MC_00015
stypis02_MC_00016
stypis02_MC_00017
stypis02_MC_00018
stypis02_MC_00019
stypis02_MC_00020
stypis02_MC_00021
stypis02_MC_00022
stypis02_MC_00023
stypis02_MC_00024
stypis02_MC_00025
stypis02_MC_00026
stypis02_MC_00027
stypis02_MC_00028
stypis02_MC_00029
stypis02_MC_00030
stypis02_MC_00031
stypis02_MC_00032
stypis02_MC_00041
stypis02_MC_00042
stypis02_MC_00043
stypis02_MC_00044
stypis02_MC_00080
stypis02_MC_00081
stypis02_MC_00082
stypis02_MC_00083
stypis02_MC_00084
stypis02_MC_00085
stypis02_MC_00086
stypis02_MC_00087
stypis02_MC_00088
stypis02_MC_00089
stypis02_MC_00090
stypis02_MC_00091
stypis02_MC_00092
stypis02_MC_00093
stypis02_MC_00094
stypis02_MC_00095
stypis02_MC_00096
stypis02_MC_00097
stypis02_MC_00098
stypis02_MC_00099
stypis02_MC_00100
stypis02_MC_00101
stypis02_MC_00102
stypis02_MC_00103
stypis02_MC_00104
stypis02_MC_00105
stypis02_MC_00106
stypis02_MC_00107
stypis02_MC_00000
stypis02_MC_00001
stypis02_MC_00002
stypis02_MC_00003
stypis02_MC_00004
stypis02_MC_00005
stypis02_MC_00006
stypis02_MC_00007
stypis02_MC_00008
stypis02_MC_00009
stypis02_MC_00010
stypis02_MC_00011
Fold-change thresholds
FC ≥
2
Minimum fold-change
Clip FC ≤
0
Scale maximum fold-change
Lower limit of selection depends on minimum fold-change.
Apply