Cell Atlas
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Pristina leidyi
Aedes aegypti
Drosophila melanogaster (Fly Cell Atlas)
Paraspadella gotoi (adult)
Ciona intestinalis (larva)
Mus musculus (Tabula muris)
Acropora millepora (adult)
Aurelia coerulea
Clytia hemisphaerica (larva)
Clytia hemisphaerica (medusa)
Hydra vulgaris (polyp)
Hydractinia symbiolongicarpus
Nematostella vectensis (adult)
Oculina arbuscula (adult)
Oculina patagonica (adult)
Stylophora pistillata (adult)
Stylophora pistillata (adult 2)
Stylophora pistillata (polyp)
Stylophora pistillata (larva)
Turritopsis rubra
Xenia sp.
Mnemiopsis leidyi
Magallana gigas (larva)
Caenorhabditis elegans (L2 larva)
Caenorhabditis elegans (adult)
Cladtertia collaboinventa (H23 strain)
Hoilungia hongkongensis (H13 strain)
Trichoplax adhaerens (H1 strain)
Trichoplax sp. (H2 strain)
Prostheceraeus crozeri (larva)
Schistosoma mansoni (adult)
Schmidtea mediterranea (adult)
Amphimedon queenslandica (adult)
Amphimedon queenslandica (larva)
Halisarca dujardinii (adult)
Spongilla lacustris (adult)
Arabidopsis thaliana (only adult tissues)
Glycine max (whole plant)
Xenoturbella bocki
Information
Atlas overview
Gene lists
Gene modules
Cell type markers
Gene view
Gene ontology
Cross-species
Show all
Cell Atlas
Information
Atlas overview
Gene lists
Gene modules
Cell type markers
Gene view
Gene ontology
Cross-species
Metacell projection
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Export data
Format
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TSV
JSON
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link
See also
Downloads
REST API
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Cells
Metacells
Labels
Links
Color by
Cell type
CytoTRACE
Median UMIs
Gene expression
Metacell selection
List markers
Filter heatmap
Gene expression heatmap
Copy link
Export data
Format
CSV
TSV
JSON
Label
View
Download
Copy
API
link
See also
Downloads
REST API
Genes
5 markers per cluster
Number of markers per cluster
Metacells
All metacells
Filter metacells
Select all metacells
CILIATED_CELLS
EPIDERMIS
EXCRETORY
GLAND1
GLAND2
GLAND3
GLAND4
GUT
MUSCLE
NEURON
PHARYNGEAL
PIGMENT
SECRETORY_EPITHELIIUM_1
SECRETORY_EPITHELIIUM_2
SECRETORY_EPITHELIIUM_3
SECRETORY_EPITHELIIUM_4
unk1
unk2
unk3
unk4
unk5
unk7
unk8
unk9
xenboc01_MC_00141
xenboc01_MC_00154
xenboc01_MC_00146
xenboc01_MC_00157
xenboc01_MC_00138
xenboc01_MC_00168
xenboc01_MC_00167
xenboc01_MC_00084
xenboc01_MC_00145
xenboc01_MC_00166
xenboc01_MC_00067
xenboc01_MC_00158
xenboc01_MC_00149
xenboc01_MC_00142
xenboc01_MC_00139
xenboc01_MC_00108
xenboc01_MC_00159
xenboc01_MC_00144
xenboc01_MC_00162
xenboc01_MC_00140
xenboc01_MC_00155
xenboc01_MC_00151
xenboc01_MC_00120
xenboc01_MC_00152
xenboc01_MC_00110
xenboc01_MC_00025
xenboc01_MC_00026
xenboc01_MC_00077
xenboc01_MC_00118
xenboc01_MC_00147
xenboc01_MC_00094
xenboc01_MC_00039
xenboc01_MC_00113
xenboc01_MC_00027
xenboc01_MC_00112
xenboc01_MC_00052
xenboc01_MC_00100
xenboc01_MC_00103
xenboc01_MC_00127
xenboc01_MC_00101
xenboc01_MC_00065
xenboc01_MC_00086
xenboc01_MC_00088
xenboc01_MC_00033
xenboc01_MC_00048
xenboc01_MC_00087
xenboc01_MC_00105
xenboc01_MC_00037
xenboc01_MC_00041
xenboc01_MC_00131
xenboc01_MC_00029
xenboc01_MC_00028
xenboc01_MC_00128
xenboc01_MC_00092
xenboc01_MC_00043
xenboc01_MC_00074
xenboc01_MC_00078
xenboc01_MC_00045
xenboc01_MC_00056
xenboc01_MC_00032
xenboc01_MC_00080
xenboc01_MC_00129
xenboc01_MC_00295
xenboc01_MC_00251
xenboc01_MC_00123
xenboc01_MC_00115
xenboc01_MC_00075
xenboc01_MC_00060
xenboc01_MC_00049
xenboc01_MC_00031
xenboc01_MC_00133
xenboc01_MC_00150
xenboc01_MC_00165
xenboc01_MC_00109
xenboc01_MC_00072
xenboc01_MC_00091
xenboc01_MC_00064
xenboc01_MC_00073
xenboc01_MC_00081
xenboc01_MC_00054
xenboc01_MC_00107
xenboc01_MC_00121
xenboc01_MC_00046
xenboc01_MC_00061
xenboc01_MC_00096
xenboc01_MC_00116
xenboc01_MC_00055
xenboc01_MC_00114
xenboc01_MC_00051
xenboc01_MC_00038
xenboc01_MC_00070
xenboc01_MC_00071
xenboc01_MC_00097
xenboc01_MC_00095
xenboc01_MC_00059
xenboc01_MC_00042
xenboc01_MC_00089
xenboc01_MC_00119
xenboc01_MC_00106
xenboc01_MC_00069
xenboc01_MC_00066
xenboc01_MC_00076
xenboc01_MC_00050
xenboc01_MC_00082
xenboc01_MC_00136
xenboc01_MC_00083
xenboc01_MC_00111
xenboc01_MC_00104
xenboc01_MC_00099
xenboc01_MC_00102
xenboc01_MC_00132
xenboc01_MC_00030
xenboc01_MC_00085
xenboc01_MC_00068
xenboc01_MC_00117
xenboc01_MC_00035
xenboc01_MC_00044
xenboc01_MC_00079
xenboc01_MC_00058
xenboc01_MC_00098
xenboc01_MC_00125
xenboc01_MC_00040
xenboc01_MC_00331
xenboc01_MC_00047
xenboc01_MC_00137
xenboc01_MC_00063
xenboc01_MC_00036
xenboc01_MC_00126
xenboc01_MC_00130
xenboc01_MC_00062
xenboc01_MC_00134
xenboc01_MC_00090
xenboc01_MC_00057
xenboc01_MC_00034
xenboc01_MC_00135
xenboc01_MC_00053
xenboc01_MC_00163
xenboc01_MC_00148
xenboc01_MC_00093
xenboc01_MC_00191
xenboc01_MC_00226
xenboc01_MC_00230
xenboc01_MC_00203
xenboc01_MC_00219
xenboc01_MC_00178
xenboc01_MC_00197
xenboc01_MC_00187
xenboc01_MC_00180
xenboc01_MC_00174
xenboc01_MC_00199
xenboc01_MC_00223
xenboc01_MC_00217
xenboc01_MC_00211
xenboc01_MC_00176
xenboc01_MC_00216
xenboc01_MC_00202
xenboc01_MC_00228
xenboc01_MC_00215
xenboc01_MC_00201
xenboc01_MC_00175
xenboc01_MC_00195
xenboc01_MC_00209
xenboc01_MC_00182
xenboc01_MC_00193
xenboc01_MC_00221
xenboc01_MC_00172
xenboc01_MC_00183
xenboc01_MC_00213
xenboc01_MC_00232
xenboc01_MC_00170
xenboc01_MC_00192
xenboc01_MC_00179
xenboc01_MC_00207
xenboc01_MC_00181
xenboc01_MC_00169
xenboc01_MC_00233
xenboc01_MC_00225
xenboc01_MC_00184
xenboc01_MC_00205
xenboc01_MC_00196
xenboc01_MC_00194
xenboc01_MC_00200
xenboc01_MC_00222
xenboc01_MC_00185
xenboc01_MC_00188
xenboc01_MC_00210
xenboc01_MC_00227
xenboc01_MC_00224
xenboc01_MC_00190
xenboc01_MC_00212
xenboc01_MC_00177
xenboc01_MC_00206
xenboc01_MC_00214
xenboc01_MC_00229
xenboc01_MC_00186
xenboc01_MC_00220
xenboc01_MC_00208
xenboc01_MC_00173
xenboc01_MC_00189
xenboc01_MC_00325
xenboc01_MC_00300
xenboc01_MC_00318
xenboc01_MC_00314
xenboc01_MC_00252
xenboc01_MC_00279
xenboc01_MC_00249
xenboc01_MC_00310
xenboc01_MC_00268
xenboc01_MC_00299
xenboc01_MC_00288
xenboc01_MC_00274
xenboc01_MC_00278
xenboc01_MC_00264
xenboc01_MC_00257
xenboc01_MC_00247
xenboc01_MC_00266
xenboc01_MC_00330
xenboc01_MC_00281
xenboc01_MC_00239
xenboc01_MC_00319
xenboc01_MC_00263
xenboc01_MC_00298
xenboc01_MC_00316
xenboc01_MC_00326
xenboc01_MC_00303
xenboc01_MC_00337
xenboc01_MC_00238
xenboc01_MC_00338
xenboc01_MC_00261
xenboc01_MC_00277
xenboc01_MC_00329
xenboc01_MC_00259
xenboc01_MC_00248
xenboc01_MC_00333
xenboc01_MC_00271
xenboc01_MC_00240
xenboc01_MC_00335
xenboc01_MC_00312
xenboc01_MC_00286
xenboc01_MC_00254
xenboc01_MC_00328
xenboc01_MC_00236
xenboc01_MC_00289
xenboc01_MC_00245
xenboc01_MC_00307
xenboc01_MC_00282
xenboc01_MC_00304
xenboc01_MC_00315
xenboc01_MC_00270
xenboc01_MC_00296
xenboc01_MC_00260
xenboc01_MC_00309
xenboc01_MC_00256
xenboc01_MC_00290
xenboc01_MC_00305
xenboc01_MC_00250
xenboc01_MC_00292
xenboc01_MC_00284
xenboc01_MC_00317
xenboc01_MC_00327
xenboc01_MC_00273
xenboc01_MC_00242
xenboc01_MC_00294
xenboc01_MC_00246
xenboc01_MC_00275
xenboc01_MC_00313
xenboc01_MC_00265
xenboc01_MC_00267
xenboc01_MC_00293
xenboc01_MC_00269
xenboc01_MC_00291
xenboc01_MC_00235
xenboc01_MC_00164
xenboc01_MC_00153
xenboc01_MC_00124
xenboc01_MC_00161
xenboc01_MC_00160
xenboc01_MC_00237
xenboc01_MC_00143
xenboc01_MC_00285
xenboc01_MC_00320
xenboc01_MC_00010
xenboc01_MC_00122
xenboc01_MC_00255
xenboc01_MC_00336
xenboc01_MC_00332
xenboc01_MC_00234
xenboc01_MC_00323
xenboc01_MC_00302
xenboc01_MC_00280
xenboc01_MC_00258
xenboc01_MC_00253
xenboc01_MC_00287
xenboc01_MC_00308
xenboc01_MC_00262
xenboc01_MC_00306
xenboc01_MC_00283
xenboc01_MC_00321
xenboc01_MC_00241
xenboc01_MC_00276
xenboc01_MC_00297
xenboc01_MC_00244
xenboc01_MC_00243
xenboc01_MC_00013
xenboc01_MC_00008
xenboc01_MC_00311
xenboc01_MC_00231
xenboc01_MC_00011
xenboc01_MC_00272
xenboc01_MC_00018
xenboc01_MC_00019
xenboc01_MC_00012
xenboc01_MC_00014
xenboc01_MC_00016
xenboc01_MC_00024
xenboc01_MC_00023
xenboc01_MC_00017
xenboc01_MC_00003
xenboc01_MC_00001
xenboc01_MC_00009
xenboc01_MC_00005
xenboc01_MC_00006
xenboc01_MC_00000
xenboc01_MC_00015
xenboc01_MC_00022
xenboc01_MC_00020
xenboc01_MC_00004
xenboc01_MC_00198
xenboc01_MC_00156
xenboc01_MC_00007
xenboc01_MC_00021
xenboc01_MC_00002
xenboc01_MC_00324
xenboc01_MC_00301
xenboc01_MC_00218
xenboc01_MC_00204
xenboc01_MC_00171
xenboc01_MC_00322
xenboc01_MC_00334
Fold-change thresholds
FC ≥
2
Minimum fold-change
Clip FC ≤
0
Scale maximum fold-change
Lower limit of selection depends on minimum fold-change.
Apply