Gene	Description	Domains	Species
Aque_Aqu2.1.06628_001	—	HLH	Amphimedon queenslandica
Aque_Aqu2.1.10533_001	Myc proto-oncogene protein	HLH	Amphimedon queenslandica
Aque_Aqu2.1.10781_001	cDNA FLJ51262, highly similar to N-myc proto-oncogene protein	HLH	Amphimedon queenslandica
Aque_Aqu2.1.18085_001	Aryl hydrocarbon receptor nuclear translocator	HLH, PAS, PAS_11	Amphimedon queenslandica
Aque_Aqu2.1.21049_001	cDNA FLJ59531, highly similar to Transcription factor E3	HLH	Amphimedon queenslandica
Aque_Aqu2.1.21216_001	cDNA FLJ53591, highly similar to Hairy/enhancer-of-split related with YRPW motif 2	HLH	Amphimedon queenslandica
Aque_Aqu2.1.23867_001	Sterol regulatory element-binding protein 1	HLH	Amphimedon queenslandica
Aque_Aqu2.1.26986_001	Neurogenin-3	HLH	Amphimedon queenslandica
Aque_Aqu2.1.28679_001	cDNA FLJ90160 fis, clone HEMBB1002661, highly similar to Hairy/enhancer-of-split related with YRPW motif 1	Hairy_orange, HLH	Amphimedon queenslandica
Aque_Aqu2.1.29954_001	Upstream stimulatory factor 2	HLH	Amphimedon queenslandica
Aque_Aqu2.1.30486_001	Transcription factor AP-4 (Activating enhancer binding protein 4) variant	HLH	Amphimedon queenslandica
Aque_Aqu2.1.32214_001	—	HLH	Amphimedon queenslandica
Aque_Aqu2.1.34614_001	Single-minded homolog 1	HLH, PAS, PAS_11	Amphimedon queenslandica
Aque_Aqu2.1.35504_001	Achaete-scute homolog 5	HLH	Amphimedon queenslandica
Aque_Aqu2.1.35745_001	Transcription factor 12	HLH	Amphimedon queenslandica
Aque_Aqu2.1.36438_001	Max-like protein X	HLH	Amphimedon queenslandica
Aque_Aqu2.1.37493_001	Protein max	HLH, UPF0542	Amphimedon queenslandica
Aque_Aqu2.1.39736_001	Williams-Beuren syndrome chromosome region 14 protein 2	HLH	Amphimedon queenslandica
Aque_Aqu2.1.41999_001	MXD3 protein	HLH	Amphimedon queenslandica
Aque_Aqu2.1.42597_001	—	HLH	Amphimedon queenslandica